MMVT - Multi-Modality Visualization Tool | Gallery

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MMVT
Gallery

Figures

Videos

Figures

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Anatomy
EEG MEG
fMRI PET
Connectivity
Depth Electrodes

Neuroanatomy flat brain with labels and MRI

Flat Brain Map

Flatten brain with the DKT40 Freesurfer cortical atlas

Neuroanatomy 3D sliced brain with MRI scans

3D slicer

Neuroanatomy laus125 rendered labels

DKT40 Altlas

Rendering of the Freesurfer DKT40 cortical atlas

Neuroanatomy right hemisphere including cortex and subcortical structure with MRI display

Medial Wall

Hiding one hemisphere for visualizing the medial wall

Neuroanatomy rendered left hemisphere and MRI display

Transparent Half Brain

Hiding one side of the brain

Neuroanatomy left hemisphere with labels and MRI display

DKT40 Medial Wall Parcellation

The medial wall parcellated using the DKT40 Freesurfer atlas

Neuroanatomy 3D rendered brain with pial surface on the MRI display

Transparent Brain

Transparent brain with the pial surface in the slices viewer

Neuroanatomy laus125 transperent labels.

Cortical Curvatures

Plotting the cortical curvatures using colors from the DKT40 Freesurfer atlas

Neuroanatomy 3D skull thickness with MRI display

Skull Thikness

Panel for calculating the skull thickness and attaching a device

Neuroanatomy laus125 labels

DKT40 atlas in solid mode

Neuroanatomy 3D brain with zoom around selected area on the MRI display

Zooming in the slices viewer

Using interpolation to zoom in the MRI slices viewer

Neuroanatomy inflated brain with labels contours and MRI

DKT40 Atlas Contours

DKT40 Freesurfer cortical atlas contours

Depth Electrodes 3D view using a slicer with real outer skin taken from the MRI. MRI scans with pial and electrodes display. Data taken from an electrode.

Depth Electrodes

Depth Electrodes in a rendered 3D slicer rendered brain (CT in blue) & evoked response

Neuroanatomy flat brain with labels contours and MRI

DKT40 Atlas Contours on the Flat Brain

Neuroanatomy inflated brain with labels and MRI

Inflating the Brain

Semi inflated brain

MEG on flat brain with pial surface display on MRI scans

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MEG clusters data on infalted brain with MRI display

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MEG and EEG ROIS ts data wtih pial surface display on MRI scans

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3D EEG helmet with real outer skin taken from MRI scan.

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3D MEG helmet with real outer skin taken from MRI scan.

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MEG sensors data

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MEG sensors ROIS and pial surface display on MRI scan

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MEG sensors data

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MEG and MEG sensors on 3D rendered brain with MRI display

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MEG on semi inflated brain with pial surface display on MRI scans

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MEG and MEG sensors with real outer skin taken from MRI scan

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MEG with real outer skin taken from MRI scan

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fMRI 3D brain with white background.

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fMRI 3D brain with real outer skin taken from MRI scans.

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fMRI 3D inflated brain with laus125 labels contours and interactive MRI scans.

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fMRI 3D inflated brain with cotumized color bar and interactive MRI scans display.

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fMRI flat brain with information about the selected blob's clusters and interactive MRI scans display.

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fMRI 3D inflated brain with information about the selected blob's clusters and interactive MRI scans display.

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fMRI 3D inflated brain with interactive MRI scans display.

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fMRI on 3D inflated brain.

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Brain connectivity with outer skin and subcorticals

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Brain connectivity over time

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Brain connectivity on flat brain display

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Brain connectivity 3D rendered brain

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Brain connectivity shown on one hemisphere

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Brain connectivity with real outer skin taken fron MRI scan.

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Depth Electrodes 3D view using a slicer with real outer skin taken from the MRI. MRI scans with pial and electrodes display. Data taken from an electrode.

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Depth Electrodes from multiple patients displayed on 3D rendered brain

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Depth Electrodes displayed on 3D rendered brain with real outer skin display taken from MRI scan.

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Depth Electrodes from multiple patients displayed on 3D rendered brain

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Depth Electrodes and fMRI on 3D brain.

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Depth Electrodes and fMRI on 3D brain. Including MRI scans and data from the electrodes.

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Depth Electrodes and fMRI on 3D rendered brain with white background.

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MEG aand Depth Electrodes 3D brain dispay with MRI scans and data from the electrodes.

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Selecting each Depth Electrode to display it's data in different color and interactive MRI scans showing ech electrode position.

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3D sliced brain with Depth Electrodes. Each lead colored with different color.

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3D ECOG displayed with only one hemisphere displayed.

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3D ECOG displayed on rendered brain.

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Depth electrodes with 3D brain display showing data from selected electrode and interactive MRI scans.

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Depth electrodes with 3D brain display showing data from selected electrode and the closest areas on the brain to that electrodes. Including interactive MRI scans.

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3D sliced brain with Depth Electrodes. Each lead colored with different color and real outer skin taken from MRI scan.

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Videos

Depth Electrodes displayed on 3D rendered brain with real outer skin display taken from MRI scan.

Depth Electrodes with Outer Skin

Inflating & Rotating Brain

3D MEG helmet with real outer skin taken from MRI scan.

MEG Helmet with Outer Skin

3D sliced brain with Depth Electrodes. Each lead colored with different color and real outer skin taken from MRI scan.

Inflating Brain

Inflating brain, from pial to inflated and to flat, with MEG evoked response.

MMVT 3D slicer video thumbnail

3D Brain Slicing

MMVT Inflating brain video thumbnail

Inflating Brain

Inflating brain, from pial to inflated and to flat, with MEG evoked response.

MMVT Ecog video thumbnail

ECOG

MMVT labels connectivity video thumbnail

Labels Connectivity

MMVT Depth Electrodes video thumbnail

Depth Electrodes

MMVT EEG helmet video thumbnail

EEG Helmet

MMVT fMRI resting state connectivity and raw video thumbnail

fMRI Resting State Connectivity and Raw

MMVT Finding Depth Electrodes in CT video thumbnail

Findig Electrodes in CT

MMVT Ecog vs MEG resting state power spectrum video thumbnail

ECOG vs MEG Resting State Power-spectrum

Cortical labels were created around the ECOG electrodes and their power-spectrum was calculated base on MNE source estimate.

MMVT Ecog vs MEG resting state video thumbnail

ECOG vs MEG Resting State

ECOG LFPs vs MEG source estimate around each electrode using MNE.

MMVT skull thickness video thumbnail

Skull Thikness

MMVT selecting depth electrodes video thumbnail

Selecting Electrodes

MMVT streaming Depth Electrodes video thumbnail

Streaming

MMVT Presentation to Dr. Andrew Cole video thumbnail

MMVT Presentation

MMVT presentation to the director of Massachusetts General Hospital Epilepsy Service Dr. Andrew James Cole.

MMVT fMRI resting connectivity video thumbnail

fMRI Rest Connectivity

MMVT MEG clusters video thumbnail

MEG Clusters

MMVT Inflating ECOG electrodes video thumbnail

Inflating ECOG Electrodes

We created a cortical label around each ECOG electrode and inflated the brain. See what happens to the grid shape.

Volumetric Statistical Test

Tempspatial ttest Results of MEG Source Estimate

Visit our GitHub project page

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